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2'-Deoxy-5'-O-DMT-2'-fluorouridine

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2'-Deoxy-5'-O-DMT-2'-fluorouridine manufacturers

2'-Deoxy-5'-O-DMT-2'-fluorouridine Basic information
Product Name:2'-Deoxy-5'-O-DMT-2'-fluorouridine
Synonyms:5'-O-(4,4'-DIMETHOXYTRITYL)-2'-FLUORO-D-URIDINE;2'-Deoxy-5'-O-DMT-2'-fluoro-D-uridine;2'-Deoxy-5'-O-DMT-2'-fluorouridine;5'-O-[Bis(4-methoxyphenyl)(phenyl)methyl]-2'-deoxy-2'-fluorouridine;5'-O-(4,4'-DiMethoxytrityl)-2'-fluoro-2'-deoxyuridine;1-((2R,3R,4R,5R);-3-fluoro-4-hydroxytetrahydrofuran-2-yl);-5-((Bis(4-methoxyphenyl)
CAS:146954-74-7
MF:C30H29FN2O7
MW:548.56
EINECS:2017-001-1
Product Categories:Modified(deoxy)nucleoside
Mol File:146954-74-7.mol
2'-Deoxy-5'-O-DMT-2'-fluorouridine Structure
2'-Deoxy-5'-O-DMT-2'-fluorouridine Chemical Properties
Melting point 118-120 °C
density 1.38±0.1 g/cm3(Predicted)
storage temp. 2-8°C
pka9.39±0.10(Predicted)
form Powder
color White to Pale Yellow
InChIKeyCSSFZSSZXOCCJB-MNBKXICWNA-N
SMILESN1(C=CC(=O)NC1=O)[C@@H]1O[C@H](COC(C2=CC=CC=C2)(C2=CC=C(C=C2)OC)C2=CC=C(C=C2)OC)[C@@H](O)[C@H]1F |&1:8,10,36,38,r|
Safety Information
HS Code 2934999090
MSDS Information
2'-Deoxy-5'-O-DMT-2'-fluorouridine Usage And Synthesis
Uses2'-Deoxy-5'-O-DMT-2'-fluorouridine, a nucleoside analogue, is a 5’-O-DMTr-5-FUDR derivative with potent anti-yellow fever (YFV) activity[1].
Definition2'-Deoxy-5'-O-DMT-2'-fluorouridine, a nucleoside analogue, is a 5’-O-DMTr-5-FUDR derivative with potent anti-yellow fever (YFV) activity.
Biological Activity 2'-Deoxy-5'-O-DMT-2'-fluorouridine (compound 15h) has 100% inhibition against YFV at 20 mM. 2'-Deoxy-5'-O-DMT-2'-fluorouridine proves to be noncytotoxic at concentrations up to 20 mM.
Synthesis
4,4'-Dimethoxytrityl chloride

40615-36-9

2,4(1H,3H)-Pyrimidinedione, 1-(2-deoxy-2-fluoro-β-D-xylofuranosyl)-

56287-17-3

2'-Deoxy-5'-O-DMT-2'-fluorouridine

146954-74-7

2'-Deoxy-2'-fluorouridine (3.00 g, 12.2 mmol) was dissolved in anhydrous pyridine, and the decompression concentration operation was repeated three times to achieve dehydration azeotropic distillation. Subsequently, the reaction mixture was dissolved in anhydrous pyridine (120 mL) under argon protection, 4,4'-dimethoxytrityl chloride (4.55 g, 13.4 mmol) was added, and the reaction was stirred for 3 hours at room temperature. After completion of the reaction, ethyl acetate (150 mL) and water (60 mL) were added to the reaction mixture and layered. The organic layer was washed sequentially with 5% aqueous sodium bicarbonate (20 mL x 3), water (20 mL) and saturated saline (20 mL), followed by drying with anhydrous sodium sulfate. After filtration, the solvent was removed by evaporation and the residue was purified by silica gel column chromatography (eluent: hexane/ethyl acetate = 50:50 to 0:100 (v/v) containing 1% triethylamine). The fraction containing the target product was collected and concentrated to give 1-((2R,3R,4R,5R)-5-((bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-3-fluoro-4-hydroxytetrahydrofuran-2-yl)pyrimidine-2,4(1H,3H)-dione (8.48 g, quantitative yield).

References[1] Christopher McGuigan, et al. Anti-flavivirus Activity of Different Tritylated Pyrimidine and Purine Nucleoside Analogues. ChemistryOpen. 2016 Jan 21;5(3):227-35. DOI:10.1002/open.201500216
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