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5-Fluoroindole

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CAS:399-52-0
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5-Fluoroindole Basic information
Product Name:5-Fluoroindole
Synonyms:5-FLUORO-3-METHYLINDOLE;1H-Indole, 5-fluoro-;5-FLUOROINDOLE(5FI);5- Fluoroindole,5-Fluoro-1H-indole;5-Fluoroindole, 98% 1GR;NSC 88613;5-Fluoroindole 98%;Indole, 5-fluoro-
CAS:399-52-0
MF:C8H6FN
MW:135.14
EINECS:206-917-4
Product Categories:Indoles;Indole Series;Building Blocks;Heterocyclic Building Blocks;Simple Indoles;Indole;CHIRAL CHEMICALS;Fluorinated heterocyclic series;Heterocyclic Fluorinated Building Blocks;Other Fluorinated Heterocycles;Building Blocks;C7 to C9;Chemical Synthesis;Fluorinated Building Blocks;Heterocyclic Building Blocks;blocks;FluoroCompounds;IndolesOxindoles;Indole/indoline/oxindole;Indole and Indoline;Indoles and derivatives
Mol File:399-52-0.mol
5-Fluoroindole Structure
5-Fluoroindole Chemical Properties
Melting point 45-48 °C (lit.)
Boiling point 120 °C / 1mmHg
density 1.1203 (estimate)
Fp >230 °F
storage temp. Keep in dark place,Inert atmosphere,2-8°C
solubility Chloroform (Slightly), Methanol (Slightly)
pka16.16±0.30(Predicted)
form Crystalline Powder
color Off-white
BRN 112350
InChIInChI=1S/C8H6FN/c9-7-1-2-8-6(5-7)3-4-10-8/h1-5,10H
InChIKeyODFFPRGJZRXNHZ-UHFFFAOYSA-N
SMILESN1C2=C(C=C(F)C=C2)C=C1
CAS DataBase Reference399-52-0(CAS DataBase Reference)
NIST Chemistry Reference1H-indole, 5-fluoro-(399-52-0)
Safety Information
Hazard Codes Xi
Risk Statements 36/37/38
Safety Statements 26-36
WGK Germany 3
10
HazardClass IRRITANT
HS Code 29339900
MSDS Information
ProviderLanguage
5-Fluoro-1H-indole English
ACROS English
SigmaAldrich English
ALFA English
5-Fluoroindole Usage And Synthesis
Chemical Propertiesoff-white crystalline powder
Uses5-Fluoroindole is a reactant used in various syntheses. It was used in the synthesis of Spirotetrahydro β-Carbolines (Spiroindolones), which is a new class of potent and orally efficacious compounds for the treatment of malaria. 5-Fluoroindole was also a reactant in direct indole and pyrrole couplings to carbonyl compound in total synthesis of Acremoauxin A and Oxazinin 3.
Application 5-fluoroindole is an organofluorine compound that is the 5-fluoro derivative of indole. It is a reagent involved in a variety of biochemical preparation procedures including:
  • Reactant for preparation of 5-HT6 receptor ligands
  • Reactant for preparation of tryptophan dioxygenase inhibitors pyridyl-ethenyl-indoles as potential anticancer immunomodulators
  • Reactant for preparation of antitumor agents
  • Reactant for preparation of antibacterial agents
  • Reactant for preparation of immunosuppressive agents
  • Reactant for preparation of Sodium-Dependent Glucose Co-transporter 2 (SGLT2) Inhibitors for the Management of Hyperglycemia in Diabetes
  • Reactant for preparation of Myeloperoxidase Inhibitors
  • Reactant for preparation of Potent Selective Serotonin Reuptake Inhibitors
Preparation5-Fluoroindole is prepared from 2-(5-fluoro-2-nitrophenyl)-5-acetonitrile.
synthesis of 5-fluoroindole
10% Pd/C (110 mg) was transferred into a round-bottom flask under a nitrogen atmosphere, followed by the addition of 2-(5-fluoro-2-nitrophenyl)-5-acetonitrile (564 mg, 3.13 mmol) in anhydrous ethanol (25 mL). The mixture was degassed and backfilled with hydrogen gas for a total of three cycles, then stirred overnight. After replacing the hydrogen with nitrogen, a second portion of 10% Pd/C (110 mg) was added to the reaction mixture, and hydrogen gas was reintroduced. The completion of the reaction was monitored by ¹⁹F NMR. Subsequently, the hydrogen gas was replaced with nitrogen, and chloroform (CHCl₃) was added to quench the unreacted Pd/C. The reaction mixture was concentrated under reduced pressure, then partitioned between dichloromethane (DCM) and water. After separation, the aqueous phase was back-extracted, and the combined organic layers were washed with brine, dried over Na₂SO₄, and concentrated under reduced pressure. Column chromatography (mobile phase: DCM) afforded 5-fluoroindole as a white solid.
Yield: 342 mg, 2.53 mmol (81% yield based on 2-(5-fluoro-2-nitrophenyl)-5-acetonitrile).
¹H NMR (400 MHz, CDCl₃) δ: 7.27 (m, 3H), 6.96 (t, 1H), 6.53 (t, 1H).
¹⁹F NMR (376 MHz, CDCl₃) δ: –100.22.
DefinitionChEBI: 5-fluoroindole is an organofluorine compound that is the 5-fluoro derivative of indole.
References[1] Low-potential electrochemical polymerization of 5-fluoroindole and characterization of its polymers, G. Nie et al., J. Electroanal. Chem., 604(2), 125−132(2007); DOI: 10.1016/j.jelechem.2007.03.010.
[2] http://www.diva-portal.org/smash/get/diva2:1892692/FULLTEXT01.pdf
[3] THANIGAIMALAI PILLAIYAR. A rapid, efficient and versatile green synthesis of 3,3’-diindolylmethanes[J]. Arkivoc, 2017, 2018 1: 1-19. DOI:10.24820/ARK.5550190.P010.259.
Tag:5-Fluoroindole(399-52-0) Related Product Information
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