Fmoc-D-pipecolic acid

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Fmoc-D-pipecolic acid Basic information
Product Name:Fmoc-D-pipecolic acid
Synonyms:(R)-PIPERIDINE-1,2-DICARBOXYLIC ACID 1-(9H-FLUOREN-9-YLMETHYL) ESTER;(R)-N-FLUORENYLMETHOXYCARBONYL-2-PIPERIDINECARBOXYLIC ACID;(R)-N-FMOC-PIPERIDINE-2-CARBOXYLIC ACID;(R)-N-(9-FLUORENYLMETHYLOXYCARBONYL)-PIPERIDINE-2-CARBOXYLIC ACID;RARECHEM AR PA 0006;N-ALPHA-(9-FLUORENYLMETHOXYCARBONYL)-D-PIPECOLIC ACID;N-ALPHA-(9-FLUORENYLMETHOXYCARBONYL)-D-HOMOPROLINE;N-ALPHA-FMOC-D-PIPECOLIC ACID
CAS:101555-63-9
MF:C21H21NO4
MW:351.4
EINECS:
Product Categories:chiral;Pyridine;Amino Acids;Unusual amino acids
Mol File:101555-63-9.mol
Fmoc-D-pipecolic acid Structure
Fmoc-D-pipecolic acid Chemical Properties
Melting point 149-153°C
Boiling point 561.6±43.0 °C(Predicted)
density 1.293±0.06 g/cm3(Predicted)
storage temp. 2-8°C
solubility soluble in Methanol
pka3.97±0.20(Predicted)
form Solid
color White to pale brown
Optical Rotation20.768°(C=0.01g/ml DMF)
BRN 5485101
Major Applicationpeptide synthesis
InChI1S/C21H21NO4/c23-20(24)19-11-5-6-12-22(19)21(25)26-13-18-16-9-3-1-7-14(16)15-8-2-4-10-17(15)18/h1-4,7-10,18-19H,5-6,11-13H2,(H,23,24)/t19-/m1/s1
InChIKeyCKLAZLINARHOTG-LJQANCHMSA-N
SMILESOC(=O)[C@H]1CCCCN1C(=O)OCC2c3ccccc3-c4ccccc24
CAS DataBase Reference101555-63-9(CAS DataBase Reference)
Safety Information
Hazard Codes Xi
Risk Statements 36/37/38
Safety Statements 26-36-37/39
RIDADR 3077
WGK Germany 3
HazardClass IRRITANT
HS Code 29333990
Storage Class11 - Combustible Solids
Hazard ClassificationsEye Irrit. 2
Skin Irrit. 2
STOT SE 3
MSDS Information
ProviderLanguage
SigmaAldrich English
Fmoc-D-pipecolic acid Usage And Synthesis
Chemical Propertieswhite to light yellow crystal powde
Uses(R)-1-(((9H-Fluoren-9-yl)methoxy)carbonyl)piperidine-2-carboxylic Acid is a building block used as a reactant in the preparation cyclic tetrapeptide derivatives as histone deacetylase inhibitors and antitumor agents.
reaction suitabilityreaction type: Fmoc solid-phase peptide synthesis
Synthesis
(9H-fluoren-9-yl)methyl 2,5-dioxopyrrolidine-1-carboxylate

102774-86-7

L(-)-Pipecolinic acid

3105-95-1

FMOC-D-PIPECOLIC ACID

101555-63-9

The general procedure for the synthesis of (R)-1-(((9H-fluoren-9-yl)methoxy)carbonyl)piperidine-2-carboxylic acid from the compound (CAS: 102774-86-7) and L-2-piperidinic acid is as follows: 1. L-piperidine acid (3.6 g, 38.7 mmol) was dissolved in 40 mL of 10% sodium carbonate solution in a round-bottomed flask and stirred at room temperature for 5 min. 2. Fmoc-OSu (8.5 g, 34.8 mmol) dissolved in 35 mL of dioxane was added to the above solution and the reaction mixture was stirred overnight. 3. Upon completion of the reaction, water was added and the aqueous layer was extracted with ethyl acetate. 4. The aqueous layer was acidified to pH=2 by adding concentrated hydrochloric acid. 5. The acidified aqueous layer was extracted with ethyl acetate (3 x 40 mL). 6. 6. The organic phases were combined and washed sequentially with 1N HCl and brine, then dried with anhydrous magnesium sulfate and concentrated in vacuum to obtain a colorless oily liquid. 7. The oily liquid was dissolved in ether and cooled to give a fluffy white solid, which was washed with hexane and dried to give (S)-1-(((9H-fluoren-9-yl)methoxy)carbonyl)piperidine-2-carboxylic acid (8.2 g, 38.7 mmol, 83% yield). Product characterization data: - TLC (hexane:EtOAc:TFA = 1:1:0.2): rf = 0.60 - HPLC (gradient A) retention time = 24.6-24.8 min - 1H NMR (300 MHz, CDCl3) δ = 1.28-1.53 (m, 2H), 1.69-1.82 (m, 3H), 2.19-2.37 (m, 1H), 3.15 (t, 1H, J = 13.2 Hz), 4.05-4.33 (m, 2H), 4.37-4.49 (m, 2H), 4.76- 5.05 (m, 1H), 7.28-7.41 (m, 4H), 7.55-7.62 (m, 2H), 1.77 (s, 2H). - 13C NMR (75 MHz, CDCl3) δ = 20.72, 24.70, 26.55, 41.94, 47.25, 54.19, 67.86, 119.97, 125.08, 127.07, 127.68, 141.33, 143.89, 156.65, 177.36. - MS (ESI) m/z: 352.66 [M + H]+, calculated: 352.40 [M + H]+.

References[1] Patent: WO2013/91900, 2013, A1. Location in patent: Page/Page column 41
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