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5'-O-(4,4'-Dimethoxytrityl)-2'-O-methyluridine

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Company Name: Jiangsu Synthgene Biotechnology Co.,Ltd.  Gold
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Company Name: Allbiosyn Biotechnology Co.,LTD  Gold
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5'-O-(4,4'-Dimethoxytrityl)-2'-O-methyluridine manufacturers

5'-O-(4,4'-Dimethoxytrityl)-2'-O-methyluridine Basic information
Product Name:5'-O-(4,4'-Dimethoxytrityl)-2'-O-methyluridine
Synonyms:DMT-2'-O-METHYLURIDINE;5'-O-(DIMETHOXYTRITYL)-2'-O-METHYLURIDINE;DMT-2'-OMe-U;5'-O-DMT-2'-O-methyluridine;Uridine, 5'-O-[bis(4-Methoxyphenyl)phenylMethyl]-2'-O-Methyl-;5'-O-DMT-2'-O-methyl-D-uridine;-Bis-(S)-phosphate;Exonuclease TREX1, AGS1, CRV, DNase III, DRN3, HERNS)
CAS:103285-22-9
MF:C31H32N2O8
MW:560.6
EINECS:2017-001-1
Product Categories:Modified(deoxy)nucleoside
Mol File:103285-22-9.mol
5'-O-(4,4'-Dimethoxytrityl)-2'-O-methyluridine Structure
5'-O-(4,4'-Dimethoxytrityl)-2'-O-methyluridine Chemical Properties
density 1.35±0.1 g/cm3(Predicted)
storage temp. Sealed in dry,2-8°C
solubility Soluble in acetonitrile
form Powder
pka9.39±0.10(Predicted)
color White to Pale Yellow
InChIKeyMFDHAVFJDSRPKC-JSEYUTSUNA-N
SMILESO(C(C1=CC=C(OC)C=C1)(C1=CC=C(OC)C=C1)C1=CC=CC=C1)C[C@H]1O[C@@H](N2C=CC(=O)NC2=O)[C@H](OC)[C@@H]1O |&1:25,27,36,39,r|
Safety Information
MSDS Information
5'-O-(4,4'-Dimethoxytrityl)-2'-O-methyluridine Usage And Synthesis
Chemical PropertiesWhite to off white powder
Uses5’-O-(Dimethoxytrityl)-2’-O-methyluridine is a potential therapeutic agent. Also, it is a reagent used in the synthesis of 2’-modified-4’-thioRNA.
Synthesis
MAGNESIUM METHOXIDE

109-88-6

5'-O-(4,4'-Dimethoxytrityl)-2,2'-anhydro-D-uridine

173170-12-2

5'-O-(4,4'-DIMETHOXYTRITYL)-2'-O-METHYLURIDINE

103285-22-9

The general procedure for the synthesis of 1-((2R,3R,4R,5R)-5-((bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-4-hydroxy-3-methoxytetrahydrofuran-2-yl)pyrimidine-2,4(1H,3H)-diones from magnesium methanolate and N/A is as follows: following the literature methodology, a two-step reaction was carried out to prepare 5'-O-DMT-2,2'-O -anhydrouridine (6). Subsequently, compound 6 was converted to 5'-O-DMT-2'-O-methyluridine with reference to the method reported in the literature. This was done as follows: first, magnesium powder (0.5 g) was heated in methanol (50 mL) at 60 °C for 2 h. Excess methanol was evaporated and dried under vacuum to obtain magnesium methanolate in gray powder form. The dried magnesium methanolate (740 mg, 8.57 mmol, 6.00 eq.) was added to a suspension of compound 6 (750 mg, 1.42 mmol, 1.00 eq.) in DMF (20 mL), and the mixture was heated to 100 °C for 2 h. The reaction was carried out until the solution was clarified. After completion of the reaction, the solvent was removed by evaporation and the residue was dissolved in ethyl acetate. The organic layer was washed sequentially with NaHCO3 solution and water, dried over anhydrous Na2SO4 and concentrated under reduced pressure. The crude product was purified by silica gel column chromatography with the eluent being a dichloromethane solution containing 2-4% methanol to give compound 7 (510 mg, 0.91 mmol, 64% yield) as a white solid.1H NMR (400 MHz, CDCl3): δ (ppm) = 3.54-3.57 (m, 2H, H-C(5')), 3.65 (s, 3H, 2' -OCH3), 3.79-3.80 (m, 7H, H-C(2'), DMT-OCH3), 3.98-4.01 (m, 1H, H-C(4')), 4.45-4.50 (m, 1H, H-C(3')), 5.26 (d, 1H, J = 8.1 Hz, H-C(5)), 5.97 (s, 1H, H-C(1' )), 6.82-6.86 (m, 4H, DMT-Har), 7.24-7.39 (m, 9H, DMT-Har), 8.03 (d, 1H, J = 8.1 Hz, H-C(6)); MS (ESI): m/z = 583.1 [M + Na]+.

References[1] Bioorganic and Medicinal Chemistry, 2013, vol. 21, # 20, p. 6171 - 6180
5'-O-(4,4'-Dimethoxytrityl)-2'-O-methyluridine Preparation Products And Raw materials
Raw materialsMagnesium methoxide-->5'-O-(4,4'-Dimethoxytrityl)-2,2'-anhydro-D-uridine
Preparation ProductsDMT-2'O-Methyl-rU Phosphoramidite
Tag:5'-O-(4,4'-Dimethoxytrityl)-2'-O-methyluridine(103285-22-9) Related Product Information
N-Acetyl-5′-O-[bis(4-methoxyphenyl)phenylmethyl]cytidine 5'-O-DMT-2'-TBDMS-Uridine 5'-O-(4,4'-DIMETHOXYTRITYL)-2'-FLUORO-D-URIDINE 2'-O-TBDMS-5'-O-DMT-N4-Ac cytidin 5'-O-(4,4'-Dimethoxytrityl)uridine 2'-O-Methyluridine DMT-2μ-O-Me-rU amidite 5'-O-(Dimethoxytrityl)-5-fluoro-2'-O-methyluridine 5'-O-(Dimethoxytrityl)-5-(1-propynyl)-2'-O-methyluridine 2'-O-Methyl-5-methyl-U CEP 5'-O-(4,4'-Dimethoxytrityl)-2'-O-methyluridine 2'-O-Methyl-5-fluoro-U CEP 2'-O-Methyl-5-bromo-U CEP 2'-O-(Trifluoroacetylaminoethyl)-5'-O-(4,4'-dimethoxytrityl)-5-methyluridine 5'-O-(Dimethoxytrityl)-2'-O-methyl-5-methyluridine 5'-O-(Dimethoxytrityl)-5-iodo-2'-O-methyluridine